Newly Characterized Genes

CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

MaizeGDB prefers not to assign formal gene names to gene models based purely on orthology. Known difficulties include inclusivity (there are over 10,000 functionally characterized Arabidopsis genes)* and some likelihood of errors in inferred functions. Unlike gene models, gene names are generally conserved unless differently named genes are found to be allelic. Of particular note, naming priveleges are customarily held by researchers who first confirm function.

We encourage researchers to use the annotation tool on the MaizeGDB gene model pages to add their insights about putative function, especially when not currently part of the Phytozome or Gramene pipelines.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The updates are made around 4:00am CST.


         Recommended Genes


One month | Six months | One year | All time

New or updated genes since one month ago. The cutoff date is August 19th, 2018.

Last UpdateGeneFull Name : DescriptionChromosome
or Bin
Gene
Model
Recent ReferenceOrthologsUpdate information
yesterdayphi121  :
8.03
GRMZM2G136567
Senior, ML et al. 1996. MNL 70:50-54     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 18th, 2018
yesterdaypebp8 phosphatidylethanolamine-binding protein8: florigen activity: complements Arabidopsis FT mutants, promoting flowering at short days. Requires functional id1 gene.(Lazakis et al 2011)
 
GRMZM2G179264
Guo, L et al. 2018. Curr Biol pp.doi: 10.1016/j.cub.2018.07.029     Reference: September 18th, 2018
Gene Product: May 6th, 2011
Variation: June 19th, 2015
Gene Model: May 6th, 2011
yesterdayrps28 ribosomal protein S28: cDNA; SSR umc1741
8.03
   Chevalier, C et al. 1996. Plant Sci 117:95-105     Reference: September 1st, 2003
Variation: September 18th, 2018
yesterdaypro1 proline responding1: (allele o6) crumpled opaque kernel; green-striped lethal seedling; responds to proline in culture
8.04
GRMZM2G375504
Zhang, SS et al. 2018. Plant Reproduction pp.doi: 10.1007/s00497-018-0344-3     Reference: July 7th, 2018
Gene Product: March 19th, 2015
Variation: September 18th, 2018
Gene Model: June 22nd, 2014
yesterdaybnlg1863  :
8.03
GRMZM2G022768
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
yesterdaybnlg2082  :
8.03
GRMZM5G842965
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
yesterdayumc1157  :
8.03
GRMZM2G058913
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
yesterdayumc1415  :
8.03
GRMZM2G063676
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
yesterdayumc1470  :
8.03
GRMZM2G145573
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
yesterdayumc1735  :
8.03
GRMZM2G164090
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
yesterdayckx10 cytokinin oxidase10: Mapped the minor band to this site.
1.07
GRMZM2G348452
Smehilova, M; et al. 2009. J Exp Bot. 60:2701-12     Reference: March 25th, 2014
Gene Product: April 4th, 2014
Variation: September 1st, 2003
Gene Model: September 18th, 2018
yesterdayumc120a  :
8.03
GRMZM2G578572
Beavis, WD et al. 1991. Theor Appl Genet 83:141-145     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 18th, 2018
yesterdaymads1 MADS1: transcripts detected in egg cells and invivo zygotes of maize, also expressed in synergids and antipodal cells. during flower development expressed in all ear spikelet organ primordia at intermediate stages
9.07
   Guo, L et al. 2018. Curr Biol pp.doi: 10.1016/j.cub.2018.07.029     Reference: September 18th, 2018
Gene Product: September 1st, 2003
Variation: April 15th, 2008
yesterdayAY110032  :
8.03
GRMZM2G102745
    Variation: July 29th, 2004
Gene Model: September 18th, 2018
yesterdayAY110450  : BRCA1/BRCA2-containing complex subunit 3
8.03
GRMZM2G152436
    Variation: July 29th, 2004
Gene Model: September 18th, 2018
yesterdaympk3 MAP kinase3: transcript and protein activity upregulated by ABA and H2O2
1.03
GRMZM2G017792
Liu, JX et al. 2018. PLoS One 13:e0203612     Reference: September 18th, 2018
Gene Product: July 9th, 2013
Variation: July 12th, 2013
Gene Model: July 9th, 2013
2 days agobnlg2235  :
8.02
AC196470.3_FG007
    Variation: September 1st, 2003
Gene Model: September 17th, 2018
2 days agocko5 cytokinin oxidase 5:
8.03
GRMZM2G325612
Gu, R et al. 2010. J Plant Growth Reg 29:428-440     Reference: March 28th, 2014
Gene Product: April 4th, 2014
Variation: September 1st, 2003
Gene Model: September 17th, 2018
2 days agoumc1817  :
8.01
GRMZM2G049781
    Variation: September 1st, 2003
Gene Model: September 17th, 2018
2 days agoras7B1 ras-related protein7B1:
 
GRMZM2G058366
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 20th, 2011
Gene Model: September 17th, 2018
3 days agobhlh19 bHLH-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.01 - 8.02
GRMZM2G066057
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 16th, 2018
3 days agoumc1304  :
8.02
GRMZM2G133552
    Variation: September 1st, 2003
Gene Model: September 16th, 2018
3 days agodxr2 deoxy xylulose reductoisomerase2:
8.01
GRMZM2G036290
Owens, BF, et al. 2014. Genetics. 198:1699-1716     Reference: January 1st, 2015
Gene Product: December 10th, 2011
Gene Model: September 16th, 2018
5 days agorf4 restorer of fertility4: dominant Rf4 restores fertility to cms-C; complementary with Rf5 and Rf6
8.01 - 8.01
   Liu, YM et al. 2018. BMC Plant Biology 18:190     Reference: September 14th, 2018
Variation: September 1st, 2003
5 days agoumc1139  : similar to Arabidopsis ubiquitin-activating enzyme E1 C
8.01
GRMZM2G007915
    Variation: September 1st, 2003
Gene Model: September 14th, 2018
5 days agoumc1414  :
8.01
GRMZM2G020148
    Variation: September 1st, 2003
Gene Model: September 14th, 2018
5 days agoumc1483  :
8.01
GRMZM5G872442
    Variation: March 30th, 2007
Gene Model: September 14th, 2018
5 days agobnl13.05a  : B-A translocations indicate that the probe does not map to 4S, 8L, or 10L.
8.01
GRMZM2G041308
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 14th, 2018
6 days agophi116  : similar to Arabidopsis Nuclear transport factor 2 (NTF2) family protein
7.06
GRMZM2G056772
    Variation: September 1st, 2003
Gene Model: September 13th, 2018
6 days agoglk59 G2-like-transcription factor 59: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.05
AC155434.2_FG005
Xu, YJ et al. 2018. Plant Cell Rep pp.doi: 10.1007/s00299-018-2262-0     Reference: February 2nd, 2018
Variation: September 13th, 2018
Gene Model: February 2nd, 2018
6 days agoAY109703  :
7.06
GRMZM2G386824
    Variation: September 25th, 2007
Gene Model: September 13th, 2018
6 days agopht5 phosphate transporter protein5:
 
GRMZM2G041595
Liu, F et al. 2016. Int J Mol Sci 17:903     Reference: June 16th, 2016
Gene Product: June 16th, 2016
Gene Model: September 13th, 2018
7 days agophi069  :
7.05
GRMZM2G448739
Senior, ML et al. 1996. MNL 70:50-54     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 12th, 2018
7 days agolls1 lethal leaf spot1: chlorotic-necrotic lesions resembling Helminthosporium carbonum infection
1.01
   Sindhu, A et al. 2018. PLoS One 13:e0201359     Reference: September 12th, 2018
Gene Product: November 5th, 2014
Variation: September 12th, 2018
7 days agoo7 opaque endosperm7: like o1; high lysine content
10.07
GRMZM2G074759
Yang, J et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00266     Reference: September 12th, 2018
Gene Product: December 20th, 2011
Variation: February 20th, 2012
Gene Model: December 16th, 2011
7 days agobnlg2259  :
7.04
GRMZM2G037444
    Variation: September 1st, 2003
Gene Model: September 12th, 2018
7 days agoumc1029  :
7.04
GRMZM2G023346
    Variation: September 1st, 2003
Gene Model: September 12th, 2018
7 days agoumc1295a  :
7.04
GRMZM2G080567
    Variation: September 1st, 2003
Gene Model: September 12th, 2018
7 days agoumc1768  :
7.04
GRMZM2G351469
Baysdorfer, C. 1993. submission to dbEST, a nucleotide sequence database     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 12th, 2018
7 days agofdl1 fused leaves1: coleoptile-first or first-second leaves fused at epidermis, curly
7.04
GRMZM2G056407
La Rocca, N, et al. 2015. J Exp Bot. 0:doi:10.1093/jxb/erv278     Reference: June 23rd, 2015
Gene Product: September 1st, 2003
Variation: September 12th, 2018
Gene Model: September 12th, 2018
7 days agopht12 phosphate transporter protein12:
 
GRMZM2G041595
Liu, F et al. 2016. Int J Mol Sci 17:903     Reference: June 16th, 2016
Gene Product: June 16th, 2016
Gene Model: September 12th, 2018
7 days agoocd1 oxalyl-CoA decarboxylase1: Mutants have an opaque phenotype and caused dramatic alterations in the metabolome in the endosperm
 
GRMZM2G175171
Yang, J et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00266     Reference: September 12th, 2018
Gene Product: September 12th, 2018
Variation: September 12th, 2018
Gene Model: September 12th, 2018
7 days agoIDP363  :
2.05
GRMZM2G042981
    Variation: March 31st, 2005
Gene Model: September 12th, 2018
8 days agoumc1214  : similar to Arabidopsis nuclear transport factor 2 and RNA recognition motif domain-containing protein
7.04
GRMZM2G167932
    Variation: September 11th, 2018
Gene Model: September 11th, 2018
8 days agobnlg1666  :
7.04
GRMZM2G081949
    Variation: September 1st, 2003
Gene Model: September 11th, 2018
8 days agobnlg1805  :
7.03
GRMZM2G167591
    Variation: September 1st, 2003
Gene Model: September 11th, 2018
8 days agoippi1 isopentenyl pyrophosphate isomerase1: similar to Arabidopsis Isopentenyl-diphosphate Delta-isomerase IIpart of multigene family encoding isopentenyl pyrophosphate isomerase
7.03
GRMZM2G108285
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Variation: September 1st, 2003
Gene Model: September 11th, 2018
8 days agoumc1708  :
7.04
GRMZM2G131228
    Variation: September 1st, 2003
Gene Model: September 11th, 2018
8 days agoumc2332  :
7.04
GRMZM2G131243
    Variation: September 11th, 2018
Gene Model: September 11th, 2018
8 days agooec17 oxygen evolving complex, 17kDa homolog: leaf cDNA csu229 similar to plant oxygen evolving complex polypeptide
7.03
GRMZM2G058070
Ettinger, WF; Theg, SM. 1992. Plant Physiol 99:791-793     Reference: July 18th, 2012
Gene Product: September 1st, 2003
Variation: July 18th, 2012
Gene Model: September 11th, 2018
8 days agoc3h32 C3H-transcription factor32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.04
GRMZM5G842019
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: July 29th, 2004
Gene Model: September 11th, 2018
9 days agopsei2 cystatin2: cDNA expressed in E. coli inhibits cysteine proteinases; sequence and gene product activity distinct from psei1
8.08
   Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: April 21st, 2008
Variation: January 15th, 2015
9 days agobx14 benzoxazinone synthesis14: encodes an O-methyltransferase that converts DIM2BOA-Glc to HDM2BOA-Glc.
2.05
GRMZM2G127418
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 8th, 2013
Variation: June 20th, 2016
Gene Model: June 20th, 2016
9 days agotps10 terpene synthase10:
10.03
GRMZM2G179092
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 28th, 2012
9 days agoga1 gametophyte factor1: (was ga9) Ga1 pollen grains are competitively superior to ga1 on Ga1 silks; Ga1-S (strong) super-gametophyte
4.02 - 4.03
   Zhang, ZG et al. 2018. Nature communications p.3678     Reference: September 10th, 2018
Variation: June 22nd, 2005
9 days agolox10 lipoxygenase10: green leaf volatiles, circadian, herbivore defense; sequence predicts plastidic location; images show location in non-chlorophyll containing organelles
4.09
GRMZM2G015419
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: January 3rd, 2018
Variation: June 6th, 2014
Gene Model: October 29th, 2015
9 days agobnlg2271  :
7.03
GRMZM2G313643
    Variation: September 1st, 2003
Gene Model: September 10th, 2018
9 days agopme1 pectin methylesterase1: pollen; cDNA and genomic sequences
10.04
GRMZM2G125356
Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012     Reference: February 13th, 2017
Gene Product: September 10th, 2018
Variation: October 8th, 2015
Gene Model: October 8th, 2015
9 days agoumc1112  :
7.03
GRMZM2G139931
    Variation: September 1st, 2003
Gene Model: September 10th, 2018
9 days agoumc1134  :
7.03
GRMZM2G105253
    Variation: September 1st, 2003
Gene Model: September 10th, 2018
9 days agoumc1324  :
7.03
GRMZM2G108874
    Variation: September 1st, 2003
Gene Model: September 10th, 2018
9 days agoprp5 pathogenesis related protein5:
1.06
GRMZM2G402631
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 25th, 2018
Variation: August 20th, 2011
Gene Model: October 30th, 2015
9 days agosci1 subtilisin-chymotrypsin inhibitor homolog1: cDNA from germinating embryo infected with Fusarium moniliforme; similar to subtilisin-chymotrypsin inhibitor
8.05
   Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 1st, 2003
Variation: August 25th, 2015
9 days agorip2 ribosome-inactivating protein2: genomic sequence produces RIP protein in E. coli; cDNA, SSR umc1782
7.04
GRMZM2G119705
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 1st, 2003
Variation: November 21st, 2017
Gene Model: July 28th, 2016
9 days agoaos1 allene oxide synthase1: expression induction by herbivory and methyl jasmonate
9.06
GRMZM2G067225
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 1st, 2003
Variation: September 24th, 2010
Gene Model: October 29th, 2015
9 days agoprp4 pathogenesis related protein4:
7.00
GRMZM2G465226
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 25th, 2018
Variation: August 29th, 2011
Gene Model: November 20th, 2014
9 days agoras6A1 ras-related protein6A1:
 
GRMZM2G075719
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 20th, 2011
Gene Model: September 10th, 2018
9 days agotps2 terpene synthase2:
 
GRMZM2G046615
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: May 28th, 2012
Variation: May 28th, 2012
Gene Model: May 28th, 2012
9 days agotps3 terpene synthase3:
 
GRMZM2G064406
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: May 28th, 2012
Variation: May 28th, 2012
Gene Model: May 28th, 2012
9 days agobx10 benzoxazinone synthesis10:
 
GRMZM2G311036
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
9 days agobx11 benzoxazinone synthesis11:
 
GRMZM2G336824
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
9 days agopme2 pectin methylesterase2:
 
GRMZM2G046618
Hawkins, JS et al. 2014. Plant J 79:375-384     Reference: September 25th, 2015
Gene Product: September 10th, 2018
Gene Model: April 26th, 2014
9 days agocyp19 cytochrome P-450 19:
 
GRMZM2G102079
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 26th, 2016
Gene Model: September 26th, 2016
9 days agopme3 pectin methylesterase3: present and expressed only in Ga1-s genotypes; mutationally inactivated version present in Ga1-m
 
   Moran Lauter, A et al. 2017. Frontiers Plant Sci 8:1926     Reference: November 27th, 2017
Gene Product: September 10th, 2018
9 days agoZm00001d048936  : candidate gene for ga1
 
GRMZM2G119698
Zhang, ZG et al. 2018. Nature communications p.3678     Reference: September 10th, 2018
Gene Product: September 10th, 2018
Gene Model: September 10th, 2018
9 days agotsah1 tryptophan synthase A homolog1: Homologous to tryptophan synthase alpha subunit but does occur as part of native tryptophan synthase. Localized in the cytosol (Kriechbaumer et al 2008). Function unknown.
1.11
GRMZM2G046163
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: October 14th, 2011
Variation: August 15th, 2014
Gene Model: September 10th, 2018
10 days agomyb152 MYB-transcription factor 152:
7.03
GRMZM2G104551
Agarwal, T et al. 2016. Sci. Rep. 6:28502     Reference: June 23rd, 2016
Variation: September 1st, 2003
Gene Model: September 9th, 2018
11 days agons2 narrow sheath2: embryonic transcription factor; duplicate factor with ns1; closely related to 2 other WOX3 genes, wox3a and wox3b, aka hb82, hb16 (Grassius named)
4.08
   Klein, H et al. 2018. G3 pp.doi: 10.1534/g3.118.200499     Reference: September 8th, 2018
Gene Product: August 25th, 2017
Variation: June 29th, 2005
11 days agodek1 defective kernel1: germless; colorless (mosaic) aleurone; floury white endosperm; anthocyanins and carotenoids absent; cultured embryos not obtained (aka clf1, gay1)
1.03
   Klein, H et al. 2018. G3 pp.doi: 10.1534/g3.118.200499     Reference: September 8th, 2018
Gene Product: September 1st, 2003
Variation: September 8th, 2018
11 days agobzip7 bZIP-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.03
GRMZM2G006578
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 8th, 2018
Gene Model: September 8th, 2018
11 days agoumc1450  :
7.03
GRMZM2G181371
    Variation: September 1st, 2003
Gene Model: September 8th, 2018
11 days agonpi394  :
7.03
GRMZM2G043254
Stuber, CW et al. 1992. Genetics 132:823-839     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 8th, 2018
11 days agons1 narrow sheath1: plant brachytic, duplicate factor with ns2; leaf sheath and blade taper, blade widens toward tip; husks narrowed, ears exposed
2.05
   Klein, H et al. 2018. G3 pp.doi: 10.1534/g3.118.200499     Reference: September 8th, 2018
Gene Product: August 25th, 2017
Variation: February 20th, 2015
11 days agonod1 narrow odd dwarf1: mutants are small plants with narrow leaves
 
GRMZM2G027821
Klein, H et al. 2018. G3 pp.doi: 10.1534/g3.118.200499   AT4G35920 (TAIR)
LOC_Os03g06120 (MSU/TIGR)
Reference: September 8th, 2018
Gene Product: March 4th, 2017
Variation: September 8th, 2018
Gene Model: March 4th, 2017
12 days agocpps2 copalyl diphosphate synthase2: encodes ent-kaurene synthase, a copalyl diphosphate synthase protein having close identity with An1 gene product; likely duplicate function explains why an1 plants are not fully dwarfed (Harris et al. 2005)
1.04
GRMZM2G044481
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Variation: January 22nd, 2018
Gene Model: September 12th, 2011
Recommended by Ed Coe:
January 8th, 2008
12 days agotps23 terpene synthase23: part of defense response to herbivory by western maize rootworm and Spodoptera littoralis but not expressed highly in most North American maize
10.03
GRMZM2G127336
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: July 21st, 2008
Variation: November 21st, 2017
Gene Model: August 22nd, 2012
12 days agotps4 terpene synthase4: gene product raised in E. coli forms same mixture of sesquiterpene olefins as tsp5 but with quantitative differences.
10.03
GRMZM2G117319
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 28th, 2012
12 days agotps5 terpene synthase5:
10.03
GRMZM2G074309
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 26th, 2012
12 days agotps26 terpene synthase26: orthologous to stc1 but function in insect herbivory not clear
6.04
GRMZM2G030583
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 5th, 2008
Variation: September 5th, 2008
Gene Model: August 22nd, 2012
12 days agoumc1713  :
7.03
AC208031.3_FG002
    Variation: September 1st, 2003
Gene Model: September 7th, 2018
12 days agoparp1 poly(ADP-ribose) polymerase1:
8.03
GRMZM2G124718
Muli, JK et al. 2018. Plant 6:8-15     Reference: April 28th, 2018
Gene Product: September 7th, 2018
Variation: August 19th, 2010
Gene Model: August 7th, 2014
12 days agoparp2 poly(ADP-ribose) polymerase2:
2.06
GRMZM5G831712
Muli, JK et al. 2018. Plant 6:8-15     Reference: April 28th, 2018
Gene Product: September 7th, 2018
Variation: August 19th, 2010
Gene Model: July 28th, 2016
12 days agotps8 terpene synthase8:
1.04 - 1.04
GRMZM2G038153
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Variation: May 29th, 2012
Gene Model: May 28th, 2012
12 days agotps1 terpene synthase1: possible plant defense gene
2.02
GRMZM2G049538
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: May 28th, 2012
Variation: August 6th, 2013
Gene Model: May 28th, 2012
12 days agotps7 terpene synthase7:
 
GRMZM2G010356
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: July 17th, 2016
Variation: May 28th, 2012
Gene Model: May 28th, 2012
12 days agoks1 kaurene synthase1:
 
GRMZM2G016922
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
12 days agoks2 kaurene synthase2:
 
GRMZM2G093526
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
12 days agoks4 kaurene synthase4:
 
AC214360.3_FG001
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
12 days agoyg3 yellow-green3: Dominant yellow green mutant; homozygous viable
 
GRMZM2G165521
Sorgini, CA. 2018. Utilizing maize genomics for pre-breeding insights     Reference: September 7th, 2018
Variation: September 7th, 2018
Gene Model: September 7th, 2018
12 days agoks6 kaurene synthase6:
 
GRMZM2G391312
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Gene Model: December 2nd, 2015
12 days agotps17 terpene synthase17:
 
GRMZM2G010356
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Variation: July 17th, 2016
Gene Model: July 17th, 2016
12 days agocyp20 cytochrome P-450 20:
 
GRMZM2G139467
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 26th, 2016
Gene Model: September 26th, 2016
12 days agotps21 terpene synthase21: has a role in fungal tolerance; involved in the producation of beta-selinene and beta-costic acid
 
GRMZM2G011151
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: May 28th, 2012
Gene Model: September 22nd, 2017
12 days agocyp22 cytochrome P-450 22:
 
GRMZM2G067591
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: February 26th, 2018
Gene Model: February 26th, 2018
12 days agosro5 similar to RCD one5: over-expression in transgenic Arabidopsis enhances abiotic stress resistance
 
GRMZM2G145236
Jiang, HH et al. 2018. Acta Physiol Plant 40:176   AT1G32230 (TAIR) Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
12 days agosro2 similar to RCD one2:
 
GRMZM5G866843
Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
12 days agosro3 similar to RCD one3:
 
GRMZM2G011469
Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
12 days agosro1 similar to RCD one1:
 
GRMZM2G122543
Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
12 days agosro6 similar to RCD one6:
 
GRMZM2G177878
Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
12 days agosro4 similar to RCD one4:
5.00
   Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Variation: September 25th, 2007
12 days agotps6 terpene synthase6:
10.03
GRMZM2G127087
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 3rd, 2008
Variation: May 28th, 2012
Gene Model: May 28th, 2012
12 days agoks3 kaurene synthase3: functionality inferred from expression data and sequence similarity (Song et al 2011; Nelissen et al 2012)
2.02
GRMZM2G093603
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Gene Model: August 15th, 2012
13 days agoglk101 G2-like-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.02
GRMZM2G064197
Zhu, X-M et al. 2018. Frontiers Plant Sci 9:966     Reference: July 25th, 2018
Variation: September 1st, 2003
Gene Model: September 6th, 2018
13 days agobnlg1792  :
7.02
GRMZM2G024615
    Variation: September 1st, 2003
Gene Model: September 6th, 2018
13 days agophd30 PHD-transcription factor 30: similar to Arabidopsis PHD finger and bromo-adjacent homology domain-containing proteinLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.02
GRMZM2G091265
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 6th, 2018
13 days agoumc1393  :
7.02
GRMZM2G052667
    Variation: September 1st, 2003
Gene Model: September 6th, 2018
13 days agoumc1787  :
7.02
GRMZM2G121189
    Variation: September 1st, 2003
Gene Model: September 6th, 2018
13 days agoAY109809  :
7.02
GRMZM2G035451
    Variation: July 29th, 2004
Gene Model: September 6th, 2018
13 days agoAY109968  :
7.02
GRMZM2G450488
    Variation: September 25th, 2007
Gene Model: September 6th, 2018
13 days agoras11C2 ras-related protein11C2: similar to Arabidopsis RAB GTPase homolog A1F
 
GRMZM2G124732
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 22nd, 2011
Gene Model: September 6th, 2018
14 days agommc0162  :
7.02
AC235546.1_FG001
    Variation: September 1st, 2003
Gene Model: September 5th, 2018
14 days agohtn1 Helminthosporium turcicum resistanceN1: formerly HtN; dominant Htn1 plants resistant to Exserohilum turcicum
8.06
GRMZM2G164612
Yang, P et al. 2018. New Phytol pp.doi: 10.1111/nph.15419   At1g66980 (TAIR)
LOC_Os01g49580 (MSU/TIGR)
Reference: September 5th, 2018
Gene Product: July 1st, 2015
Variation: July 14th, 2015
Gene Model: July 1st, 2015
14 days agoembp1 EM binding protein1 homologue: bZIP protein binds to O2 box; wheat EM orthologue
7.02
GRMZM2G095078
Busk, P and Pages, M. 1997. Protein binding to the abscisic acid-responsive element is independent of VIVIPAROUS1 in vivo. Plant Cell 9:2261-2270     Reference: September 1st, 2003
Gene Product: August 21st, 2018
Variation: September 5th, 2018
Gene Model: September 5th, 2018
14 days agoAY110473  :
7.02
GRMZM2G061562
    Variation: September 25th, 2007
Gene Model: September 5th, 2018
14 days agoAY110576  :
7.02
GRMZM2G032699
    Variation: July 29th, 2004
Gene Model: September 5th, 2018
14 days agopco103663  :
7.02
GRMZM2G125516
    Variation: September 25th, 2007
Gene Model: September 5th, 2018
15 days agocsu582  : similar to Arabidopsis Pyridoxal biosynthesis protein PDX1.3
7.00
GRMZM2G120652
    Variation: September 1st, 2003
Gene Model: September 4th, 2018
15 days agofnr2 ferredoxin NADP reductase2:
7.01
GRMZM2G011858
    Variation: October 9th, 2009
Gene Model: September 4th, 2018
15 days agoumc1159  :
7.01
GRMZM2G144726
    Variation: September 1st, 2003
Gene Model: September 4th, 2018
15 days agoumc1426  :
7.00
GRMZM2G006071
    Variation: September 1st, 2003
Gene Model: September 4th, 2018
15 days agoumc1672  :
7.00
GRMZM2G044060
    Variation: September 1st, 2003
Gene Model: September 4th, 2018
15 days agommp18  :
7.01
GRMZM2G066290
    Variation: September 4th, 2018
Gene Model: September 4th, 2018
15 days agoAW308691  :
7.01
GRMZM2G542497
    Variation: July 29th, 2004
Gene Model: September 4th, 2018
15 days agomeg2 maternally expressed gene2: Maternally transmitted alleles preferentially expressed in endosperm
7.01
GRMZM2G094054
Xiong, Y et al. 2014. BMC Plant Biology 14:204     Reference: August 29th, 2014
Variation: August 29th, 2014
Gene Model: September 4th, 2018
15 days agomeg4 maternally expressed gene4: Maternally transmitted alleles preferentially expressed in endosperm
7.02
GRMZM2G137959
Han, ZX et al. 2018. Genetics 209:983-995     Reference: July 31st, 2018
Variation: October 25th, 2009
Gene Model: September 4th, 2018
15 days agoalt7 alanine aminotransferase7: bundle sheath alanine transasminase; see also alt8, alt9
7.00
GRMZM2G120563
Tausta, SL et al. 2014. J Exp Bot 65:3543-3555     Reference: November 20th, 2014
Gene Product: August 22nd, 2014
Gene Model: September 4th, 2018
16 days agophp20719a  :
10.04
GRMZM2G139797
Jia, SG et al. 2016. G3 6:2385-2395     Reference: August 10th, 2016
Variation: September 3rd, 2018
Gene Model: September 2nd, 2018
17 days agonpi105a  : Mapped major band to this site.
10.03
GRMZM2G143356
Caffrey, JJ et al. 1995. MNL 69:3-4     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
17 days agonpi114a  : Mapped major band to this site. npi114B was called npi202 but is listed as npi114B in the database.
8.01
GRMZM2G140885
Stuber, CW et al. 1992. Genetics 132:823-839     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
17 days agonpi264  :
10.04
GRMZM2G424348
Cowen, N et al. 1992. Theor Appl Genet 84:720-724     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
17 days agonpi352  :
7.04
GRMZM5G860235
    Variation: September 2nd, 2018
Gene Model: September 1st, 2018
17 days agophp06005  :
10.03
GRMZM2G571844
Matz, EC et al. 1992. MNL 66:107     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
17 days agobhlh86 bHLH-transcription factor 86: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.03
GRMZM5G818643
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
18 days agoemp108 empty pericarp108: essential for kernel development; required for splicing of multiple introns and complex I biogenesis
 
GRMZM2G388778
Sun, F et al. 2018. Plant J pp.doi: 10.1111/tpj.14030   AT5G18390 (TAIR)
LOC_Os08g41380 (MSU/TIGR)
Reference: July 13th, 2018
Gene Product: December 27th, 2016
Variation: September 1st, 2018
Gene Model: July 13th, 2018
18 days agoemp18 empty pericarp18: mutants have an embryo-lethal phenotype; functions in mitochondrial atp6 and cox2 transcript editing
 
GRMZM2G471348
Li, X-L et al. 2018. New Phytol pp.doi: 10.1111/nph.15425     Reference: September 1st, 2018
Gene Product: December 27th, 2016
Variation: September 1st, 2018
Gene Model: September 1st, 2018
19 days agocry2 cryptochrome2:
2.04
GRMZM2G049549
Coles, N et al. 2010. Genetics 184:799-812     Reference: April 1st, 2010
Gene Product: August 31st, 2018
Variation: September 5th, 2014
Gene Model: September 5th, 2014
19 days agocry4 cryptochrome4:
4.05
       Gene Product: August 31st, 2018
19 days agogi2 gigantea2: homologous to Arabidopsis photoperiod gene gigantea.
3.03
GRMZM5G844173
Li, B et al. 2018. Genome Res pp.doi: 10.1101/gr.229716.117     Reference: August 31st, 2018
Gene Product: September 19th, 2012
Variation: September 18th, 2012
Gene Model: September 18th, 2012
19 days agomch1 maize CRY1 homolog1: Homolog to yeast 40S ribosomal protein S14 gene family (cDNA probe)
 
GRMZM5G805627
Larkin, JC et al. 1989. Genes Dev 3:500-509     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: October 14th, 2010
Gene Model: August 31st, 2018
19 days agomybr17 MYB-related-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.09
GRMZM2G071977
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: August 31st, 2018
19 days agosnrkII8 SnRK2 serine threonine protein kinase8: salt tolerance expressed in Arabidopsis host (Vilela 2013)
 
GRMZM2G138861
Wu, QQ et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12714     Reference: August 31st, 2018
Gene Product: April 14th, 2018
Variation: August 31st, 2018
Gene Model: February 11th, 2015
19 days agofkf1 flavin-binding kelch repeat f-box1: Involved in regulating the circadian clock and photoperiodic flowering
 
GRMZM2G107945
Li, B et al. 2018. Genome Res pp.doi: 10.1101/gr.229716.117     Reference: August 31st, 2018
Gene Product: July 25th, 2017
Gene Model: December 12th, 2017
19 days agocry3 cryptochrome3: a homolog of CRY2, encoding cryptochrome-2, a photoreceptor regulated by blue light and involved in floral initiation (Li et al., 2018)
 
GRMZM2G172152
Li, B et al. 2018. Genome Res pp.doi: 10.1101/gr.229716.117     Reference: August 31st, 2018
Gene Product: August 31st, 2018
Gene Model: August 31st, 2018
19 days agocry1 cryptochrome1:
5.05
GRMZM2G024739
    Gene Product: August 31st, 2018
Gene Model: August 31st, 2018
20 days agoact1 actin1: actin, one of six potential genes; genomic DNA clone; 3 introns); SSR phi115
8.03 - 8.04
   Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428     Reference: August 30th, 2018
Gene Product: September 1st, 2003
Variation: September 4th, 2013
20 days agocdo202a(mcf)  : similar to Arabidopsis adenine nucleotide transporter 1
6.07
GRMZM2G067877
    Variation: August 30th, 2018
Gene Model: August 30th, 2018
20 days agobnlg1136a  :
6.07
GRMZM5G847466
    Variation: September 1st, 2003
Gene Model: August 30th, 2018
20 days agoumc1127  :
6.08 - 6.08
GRMZM2G412937
    Variation: September 1st, 2003
Gene Model: August 30th, 2018
20 days agoumc1653  :
6.07
GRMZM2G438895
    Variation: September 1st, 2003
Gene Model: August 30th, 2018
20 days agonpi113b  : Mapped minor band to this site.
2.08
GRMZM2G035985
    Variation: September 1st, 2003
Gene Model: August 30th, 2018
20 days agonpi242a  : Upper bands mapped to this site. npi242B was called npi243 and npi242C was called npi244.
2.04
GRMZM2G132968
Caffrey, JJ et al. 1995. MNL 69:3-4     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 30th, 2018
20 days agofnsi1 flavone synthase typeI1: Encodes a flavone synthase that is of the soluble Fe2+/2- oxoglutarate-dependent dioxygenase class
 
GRMZM2G099467
Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428   AT5G24530 (TAIR) Reference: August 30th, 2018
Gene Product: August 15th, 2015
Variation: August 14th, 2015
Gene Model: August 14th, 2015
20 days agofnsii1 flavone synthase typeII1: Encodes a flavone synthase that is of the oxygen- and NADPH-dependent cytochrome P450 membrane-bound monooxygenase class
 
GRMZM2G148441
Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428     Reference: August 30th, 2018
Gene Product: August 14th, 2015
Gene Model: August 14th, 2015
20 days agofns1 flavone synthase1:
 
GRMZM2G167336
Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428     Reference: August 30th, 2018
Gene Product: September 20th, 2017
Gene Model: May 6th, 2016
20 days agoufgt3 UDP-flavone-glycosyltransferase3:
 
GRMZM2G063550
Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428     Reference: August 30th, 2018
Gene Product: August 30th, 2018
Gene Model: August 30th, 2018
20 days agotrh4 thioredoxin h homolog4:
 
GRMZM2G066612
Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428     Reference: August 30th, 2018
Gene Product: September 1st, 2003
Gene Model: August 30th, 2018
21 days agobnlg1740  : similar to Arabidopsis Cytochrome b561/ferric reductase transmembrane protein family
6.07
GRMZM2G023133
    Variation: September 1st, 2003
Gene Model: August 29th, 2018
21 days agoumc1350  :
6.07
GRMZM2G038284
    Variation: September 1st, 2003
Gene Model: August 29th, 2018
21 days agoumc1296  : similar to Arabidopsis cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4
6.07
GRMZM2G021406
    Variation: August 29th, 2018
Gene Model: August 29th, 2018
21 days agoumc1463  :
6.06
GRMZM2G010357
    Variation: September 1st, 2003
Gene Model: August 29th, 2018
21 days agoumc1490  : similar to Araidopsis double-stranded DNA-binding-like protein
6.07
GRMZM2G174741
    Variation: September 1st, 2003
Gene Model: August 29th, 2018
21 days agoumc62  : similar to Arabidopsis ribosomal protein L18ae-like protein
6.07
GRMZM2G022453
Rocheford, TR. 1994. Proc Annu Corn Sorghum Ind Res Conf 49:239-249     Reference: September 1st, 2003
Variation: August 29th, 2018
Gene Model: August 29th, 2018
21 days agoAY104289  :
6.07
GRMZM2G085849
    Variation: September 25th, 2007
Gene Model: August 29th, 2018
21 days agoAY105785  :
6.06
GRMZM2G176396
    Variation: March 21st, 2007
Gene Model: August 29th, 2018
21 days agoAY109797  : similar to Arabidopsis Ubiquitin-conjugating enzyme family protein
6.07
GRMZM2G085849
    Variation: July 29th, 2004
Gene Model: August 29th, 2018
21 days agoAY110400  :
6.07
GRMZM5G872417
    Variation: July 29th, 2004
Gene Model: August 29th, 2018
21 days agoras11C3 ras-related protein11C3:
 
GRMZM2G020661
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 24th, 2011
Gene Model: August 29th, 2018
21 days agoIDP148  :
6.06
GRMZM2G158526
    Variation: March 31st, 2005
Gene Model: August 29th, 2018
21 days agoapx5 Cytosolic ascorbate peroxidase5: leaf cDNA csu238, partial 5' sequence similar to plant ascorbate peroxidase
6.07
GRMZM2G093346
Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: August 10th, 2012
Gene Model: August 29th, 2018
22 days agoid1 indeterminate growth1: requires extended growth for flowering; vegetatively totipotent with gt1 and factors for perennialism
1.08
   Karl, JR. 2014. MNL 88:e14     Reference: August 28th, 2018
Gene Product: January 3rd, 2015
Variation: August 3rd, 2015
22 days agoubi7 ubiquitin-conjugating enzyme7:
6.05
GRMZM2G012052
van Nocker, S. 1998. Plant Physiol 116:1191     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 28th, 2018
22 days agolac2 laccase2:
6.05
GRMZM2G146152
Caparros-Ruiz, D et al. 2006. Plant Sci 171:217-225     Reference: March 31st, 2018
Gene Product: March 31st, 2018
Gene Model: August 28th, 2018
22 days agoras8A2 ras-related protein8A2:
 
GRMZM5G878008
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 20th, 2011
Gene Model: August 28th, 2018
23 days agome5 malic enzyme5:
6.05
GRMZM5G886257
Alvarez, CE et al. 2013. Photosynth Res 115:65-80     Reference: August 21st, 2014
Gene Product: August 21st, 2014
Variation: August 16th, 2011
Gene Model: August 27th, 2018
23 days agoumc1352a  :
6.05
GRMZM2G032896
    Variation: August 26th, 2018
Gene Model: August 27th, 2018
23 days agoumc1379  :
6.05
GRMZM2G117439
    Variation: September 1st, 2003
Gene Model: August 27th, 2018
23 days agoumc1388  :
6.05
GRMZM2G093325
    Variation: September 1st, 2003
Gene Model: August 27th, 2018
23 days agoumc1413  :
6.05
GRMZM2G030123
    Variation: September 1st, 2003
Gene Model: August 27th, 2018
23 days agonpi252  : similar to Arabidopsis carbon catabolite repressor protein 4-like 4
6.05
GRMZM2G054056
Senior, ML et al. 1996. MNL 70:50-54     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 27th, 2018
23 days agotor1 target of rapamycin1: similar to Arabidpsis FKBP12-rapamycin complex-associated proteinexpression is highly regulated during germination
6.05
GRMZM2G049342
Garcia, NS; Messing, J. 2017. Frontiers Plant Sci 8:1723     Reference: November 23rd, 2017
Gene Product: November 21st, 2017
Gene Model: August 27th, 2018
23 days agoAY110260  :
6.05
GRMZM2G319109
    Variation: September 25th, 2007
Gene Model: August 27th, 2018
24 days agokrp9 kinesin-related protein9: Is a member of MCAK family and may depolymerize microtubules per C. Lawrence.
6.05
GRMZM5G881464
Lawrence, CJ et al. 2002. J Mol Evol 54:42-53     Reference: September 1st, 2003
Gene Product: November 10th, 2017
Variation: September 1st, 2003
Gene Model: August 26th, 2018
24 days agoumc1114  :
6.05
GRMZM5G898274
    Variation: September 1st, 2003
Gene Model: August 26th, 2018
24 days agoumc1314  : similar to Arabidopsis Ras-related protein RABA2c
6.05
GRMZM2G061912
    Variation: September 1st, 2003
Gene Model: August 26th, 2018
25 days agovpp1 vacuolar proton pump homolog1: glucose-starved root tip cDNA closely similar to Oryza gene (TIGR match)
6.04
GRMZM2G148200
Wisniewski, J; Rogowsky, P. 2004. Plant Mol Biol. 56:325-337     Reference: July 28th, 2005
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 25th, 2018
25 days agoumc1796  :
6.04
GRMZM2G064382
    Variation: September 1st, 2003
Gene Model: August 25th, 2018
25 days agopip1b plasma membrane intrinsic protein1:
5.06
   Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: September 1st, 2003
Variation: April 26th, 2016
25 days agocipk8 calcineurin B-like-interacting protein kinase8:
 
GRMZM2G383240
Tai, F, et al. 2016. Plant Cell, Tissue and Organ Culture (PCTOC). 124:459-469     Reference: June 5th, 2017
Gene Product: August 25th, 2018
Variation: June 2nd, 2017
Gene Model: June 2nd, 2017
25 days agovpp8 vacuolar proton pump8: low copy leaf cDNA csu37, similar to yeast ATPase subunit
7.04
GRMZM2G019999
Couee, I and Chevalier, C. 1996. Nucleotide submission to dbEST     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: August 25th, 2018
25 days agoglp1 germin-like protein1:
6.05
GRMZM2G064096
Fan, Z, et al. 2005. Biochem Biophys Res Commun. 331:1257-63     Reference: February 14th, 2006
Gene Product: December 24th, 2015
Variation: August 25th, 2018
Gene Model: August 24th, 2018
25 days agorte1 rotten ear1: mutants show distinct defects in vegetative and reproductive development, eventually causing widespread sterility in its tassel and ear.
1.05
GRMZM2G166159
Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: June 24th, 2017
Variation: July 21st, 2014
Gene Model: July 19th, 2014
25 days agorte3 rotten ear3: phylogenetically related to Class II clade boron transporters
 
GRMZM2G051753
Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: June 24th, 2017
Variation: June 24th, 2017
Gene Model: June 24th, 2017
25 days agonc1 Na+ content1: loss-of-function allele confers increased accumulation of Na+ in leaves, and salt hypersensitivity.
 
GRMZM2G047616
Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: November 15th, 2017
Variation: November 15th, 2017
Gene Model: November 15th, 2017
25 days agocul2 cullin2:
 
GRMZM2G166694
Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: May 10th, 2018
Gene Model: May 10th, 2018
25 days agonhx7 Na+/H+ antiporter 7: silicon up-regulates expression
 
GRMZM2G098494
Bosnic, P et al. 2018. Environ Exp Bot pp.doi: 10.1016/j.envexpbot.2018.08.018   AT1G14660 (TAIR) Reference: August 20th, 2018
Gene Product: August 25th, 2018
Gene Model: August 20th, 2018
25 days agovpp7 vacuolar proton pump7: SNP; NCBI defines as a vacuolar proton pump-like protein
 
GRMZM2G069095
Wisniewski, J; Rogowsky, P. 2004. Plant Mol Biol. 56:325-337     Reference: July 28th, 2005
Gene Product: September 1st, 2003
Gene Model: August 25th, 2018
25 days agonhx8 Na+/H+ antiporter 8: Salt inducable
 
GRMZM2G067747
Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88   AT1G79610 (TAIR) Reference: August 25th, 2018
Gene Product: August 25th, 2018
Gene Model: August 25th, 2018
25 days agonhx5 Na+/H+ antiporter 5: shoot-specific and NaCl-specific expression.
7.05
GRMZM2G027851
Bosnic, P et al. 2018. Environ Exp Bot pp.doi: 10.1016/j.envexpbot.2018.08.018     Reference: August 20th, 2018
Gene Product: August 25th, 2018
Gene Model: August 20th, 2018
25 days agonhx1 Na+/H+ antiporter 1: root-specific and NaCl-specific expression.
 
   Zorb, C; Schubert, S. 2005. J Plant Physiol. 162:55-66     Reference: January 29th, 2010
Gene Product: August 25th, 2018
25 days agonhx2 Na+/H+ antiporter 2: shoot- and root-specific and NaCl-specific expression; predominant isoform under control conditions(mM NaCl).
 
GRMZM2G063492
Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: August 25th, 2018
Gene Model: August 20th, 2018
25 days agonhx4 Na+/H+ antiporter 4: shoot-specific expression.
 
   Zorb, C; Schubert, S. 2005. J Plant Physiol. 162:55-66     Reference: January 29th, 2010
Gene Product: August 25th, 2018
25 days agonhx6 Na+/H+ antiporter 6: root-specific and NaCl specific expression.
 
   Zorb, C; Schubert, S. 2005. J Plant Physiol. 162:55-66     Reference: January 29th, 2010
Gene Product: August 25th, 2018
26 days agobnlg2191  :
6.02
GRMZM2G047969
    Variation: September 1st, 2003
Gene Model: August 24th, 2018
26 days agoumc1105  :
6.04
GRMZM2G041258
    Variation: September 1st, 2003
Gene Model: August 24th, 2018
26 days agopgl2 polygalacturonase2: cDNA and genomic clones, sequence nearly identical to pgl1; one of 10-12 member gene family
6.03
GRMZM2G454608
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: March 10th, 2013
Gene Model: August 24th, 2018
26 days agopgl3 polygalacturonase3: cDNA and genomic clones; one of 10-12 member gene family
6.03
GRMZM2G160626
Barakate, A et al. 1993. J Mol Biol 229:797-801     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 24th, 2018
26 days agokrp5 kinesin-related protein5:
6.04
GRMZM2G575566
Lawrence, CJ et al. 2002. J Mol Evol 54:42-53     Reference: September 1st, 2003
Gene Product: November 10th, 2017
Gene Model: August 24th, 2018
26 days agoAY104775  :
6.03
GRMZM2G106427
    Variation: September 25th, 2007
Gene Model: August 24th, 2018
26 days agopgl9 exopolygalacturonase9:
 
GRMZM2G418644
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Gene Model: August 24th, 2018
27 days agopebp26 phosphatidylethanolamine-binding protein26:
 
GRMZM2G400167
Su, HH et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery299     Reference: August 23rd, 2018
Variation: December 14th, 2010
Gene Model: July 28th, 2016
27 days agoumc1257  :
6.02
GRMZM2G128485
    Variation: September 1st, 2003
Gene Model: August 23rd, 2018
27 days agoca2p4 CCAAT-HAP2-transcription factor4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Su, HH et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery299     Reference: August 23rd, 2018
Gene Product: August 9th, 2016
27 days agomch3 maize CRY1 homolog3: Homolog to yeast 40S ribosomal protein S14 gene familysimilar to Arabidopsis 40S ribosomal protein S14-3
 
GRMZM2G100462
    Variation: October 14th, 2010
Gene Model: August 23rd, 2018
27 days agocol20 C2C2-CO-like-transcription factor 20:
 
GRMZM2G414423
Su, HH et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery299     Reference: August 23rd, 2018
Gene Product: June 18th, 2018
Gene Model: August 23rd, 2018
27 days agocchh6 Cys2His2 Zinc Finger6:
 
AC205250.3_FG004
Su, HH et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery299     Reference: August 23rd, 2018
Gene Product: April 4th, 2017
Gene Model: August 23rd, 2018
28 days agoend1 early nodulin homolog1: endosperm cDNA 5C04A12 (uaz227), similar to soybean early nodulin cDNA
6.01
GRMZM2G014705
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 22nd, 2018
29 days agolrs1 liguleless related sequence1: bzip90 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.07
AC232238.2_FG004
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: August 21st, 2018
Variation: August 22nd, 2014
Gene Model: August 22nd, 2014
Recommended by Ed Coe:
January 8th, 2008
29 days agosk1 silkless ears1: pistils abort, no silks
2.03 - 2.04
GRMZM2G021786
Zhao, Y et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01227   AT3G22250 (TAIR)
LOC_Os04g44354 (MSU/TIGR)
Reference: August 21st, 2018
Gene Product: October 31st, 2016
Variation: August 21st, 2018
Gene Model: October 31st, 2016
29 days agobzip100 bZIP-transcription factor 100: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zong, N et al. 2018. J Integrative Agriculture doi: 10.1016/S2095-3119(18)61947-1     Reference: May 18th, 2018
Gene Product: August 21st, 2018
29 days agobzip22 bZIP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Chen, J et al. 2015. J Exp Bot pp.doi: 10.1093/jxb/erv527   AT1G43700 (TAIR) Reference: December 23rd, 2015
Gene Product: August 21st, 2018
29 days agobzip4 bZIP-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ma, HZ et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00436     Reference: August 21st, 2018
Gene Product: August 21st, 2018
Variation: August 21st, 2018
29 days agofea4 fasciated ear4: Mutants are semidwarfed with fasciated ears and tassels as well as greatly enlarged vegetative and inflorescence meristems.
 
   Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35     Reference: May 21st, 2018
Gene Product: August 21st, 2018
Variation: July 7th, 2017
29 days agobzip160 bZIP-transcription factor 60: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180   AT1G75390 (TAIR)
LOC_Os02g03960 (MSU/TIGR)
Reference: May 12th, 2011
Gene Product: August 21st, 2018
29 days agodlf1 delayed flowering1: tall late plant with additional nodes and leaves at flowering; no apparent response to day length
 
   Romero-Navarro, JA et al. 2017. Nature Genetics 49:476-480     Reference: May 27th, 2017
Gene Product: August 21st, 2018
Variation: February 6th, 2011
30 days agoumc1444  :
6.01
GRMZM2G473788
    Variation: September 1st, 2003
Gene Model: August 20th, 2018
30 days agoubi2 ubiquitin2: genomic sequence encodes 7 contiguous ubiquitin monomers; transcript specific probe
4.09
GRMZM2G419891
Bosnic, P et al. 2018. Environ Exp Bot pp.doi: 10.1016/j.envexpbot.2018.08.018     Reference: August 20th, 2018
Gene Product: September 1st, 2003
Variation: November 18th, 2014
Gene Model: August 7th, 2014
30 days agocipk9 calcineurin B-like-interacting protein kinase9: silicon up-regulates expression
 
GRMZM2G330049
Bosnic, P et al. 2018. Environ Exp Bot pp.doi: 10.1016/j.envexpbot.2018.08.018   AT5G10930 (TAIR) Reference: August 20th, 2018
Gene Product: May 13th, 2014
Gene Model: August 20th, 2018

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